Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC1P35251 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC1P35251 AC138028.4-201ENST00000564984 1845 ntBASIC19.16■□□□□ 0.66
RFC1P35251 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.16■□□□□ 0.66
RFC1P35251 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC1P35251 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC1P35251 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RFC1P35251 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.15■□□□□ 0.66
RFC1P35251 YBX1P2-201ENST00000489612 999 ntBASIC19.15■□□□□ 0.66
RFC1P35251 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.15■□□□□ 0.66
RFC1P35251 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.15■□□□□ 0.66
RFC1P35251 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 BCL2-203ENST00000589955 5011 ntBASIC19.15■□□□□ 0.66
RFC1P35251 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.15■□□□□ 0.66
RFC1P35251 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFC1P35251 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFC1P35251 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC1P35251 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC1P35251 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.14■□□□□ 0.66
RFC1P35251 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RFC1P35251 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RFC1P35251 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RFC1P35251 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.14■□□□□ 0.65
RFC1P35251 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RFC1P35251 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 AC117947.1-201ENST00000427448 529 ntBASIC19.14■□□□□ 0.65
RFC1P35251 PVRIG2P-201ENST00000435460 978 ntBASIC19.14■□□□□ 0.65
RFC1P35251 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RFC1P35251 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
RFC1P35251 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFC1P35251 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RFC1P35251 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.14■□□□□ 0.65
RFC1P35251 NOC2LP2-201ENST00000407594 1944 ntBASIC19.13■□□□□ 0.65
RFC1P35251 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFC1P35251 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.13■□□□□ 0.65
RFC1P35251 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.13■□□□□ 0.65
RFC1P35251 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RFC1P35251 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFC1P35251 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFC1P35251 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms