Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTNNA1P35221 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNNA1P35221 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTNNA1P35221 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNNA1P35221 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CTNNA1P35221 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNNA1P35221 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNNA1P35221 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTNNA1P35221 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNNA1P35221 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CTNNA1P35221 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CTNNA1P35221 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CTNNA1P35221 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CTNNA1P35221 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNNA1P35221 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTNNA1P35221 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.18■□□□□ 0.66
CTNNA1P35221 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.18■□□□□ 0.66
CTNNA1P35221 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.18■□□□□ 0.66
CTNNA1P35221 AP003041.3-201ENST00000527151 707 ntBASIC19.18■□□□□ 0.66
CTNNA1P35221 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNNA1P35221 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTNNA1P35221 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CTNNA1P35221 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNNA1P35221 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.18■□□□□ 0.66
CTNNA1P35221 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
CTNNA1P35221 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CTNNA1P35221 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.17■□□□□ 0.66
CTNNA1P35221 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTNNA1P35221 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.17■□□□□ 0.66
CTNNA1P35221 SLC25A1P2-201ENST00000430693 912 ntBASIC19.17■□□□□ 0.66
CTNNA1P35221 KRT18P23-201ENST00000435622 1283 ntBASIC19.17■□□□□ 0.66
CTNNA1P35221 WWOX-216ENST00000569818 525 ntBASIC19.17■□□□□ 0.66
CTNNA1P35221 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNNA1P35221 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.17■□□□□ 0.66
CTNNA1P35221 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.17■□□□□ 0.66
CTNNA1P35221 AC093010.1-201ENST00000473625 1624 ntBASIC19.17■□□□□ 0.66
CTNNA1P35221 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNNA1P35221 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CTNNA1P35221 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNNA1P35221 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNNA1P35221 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNNA1P35221 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CTNNA1P35221 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNNA1P35221 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNNA1P35221 AP003071.4-201ENST00000562276 1284 ntBASIC19.16■□□□□ 0.66
CTNNA1P35221 AL353719.1-201ENST00000566847 864 ntBASIC19.16■□□□□ 0.66
CTNNA1P35221 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNNA1P35221 CR769767.2-201ENST00000622735 460 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms