Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX1P22670 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX1P22670 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX1P22670 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RFX1P22670 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
RFX1P22670 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX1P22670 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 LINC01311-201ENST00000565162 1445 ntBASIC19.77■□□□□ 0.76
RFX1P22670 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RFX1P22670 AC138028.4-201ENST00000564984 1845 ntBASIC19.77■□□□□ 0.76
RFX1P22670 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
RFX1P22670 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX1P22670 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.77■□□□□ 0.76
RFX1P22670 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX1P22670 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX1P22670 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX1P22670 MIR3652-201ENST00000579335 131 ntBASIC19.77■□□□□ 0.76
RFX1P22670 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RFX1P22670 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX1P22670 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX1P22670 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RFX1P22670 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX1P22670 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX1P22670 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFX1P22670 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFX1P22670 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.76■□□□□ 0.75
RFX1P22670 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX1P22670 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFX1P22670 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
RFX1P22670 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX1P22670 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX1P22670 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX1P22670 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX1P22670 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms