Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.98■□□□□ 0.95
ERCC3P19447 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.98■□□□□ 0.95
ERCC3P19447 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ERCC3P19447 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 AC023511.2-201ENST00000618803 211 ntBASIC20.98■□□□□ 0.95
ERCC3P19447 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ERCC3P19447 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ERCC3P19447 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC3P19447 AC099343.3-201ENST00000605834 2503 ntBASIC20.98■□□□□ 0.95
ERCC3P19447 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.97■□□□□ 0.95
ERCC3P19447 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ERCC3P19447 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.97■□□□□ 0.95
ERCC3P19447 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.97■□□□□ 0.95
ERCC3P19447 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ERCC3P19447 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.97■□□□□ 0.95
ERCC3P19447 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ERCC3P19447 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ERCC3P19447 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.97■□□□□ 0.95
ERCC3P19447 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC3P19447 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.96■□□□□ 0.95
ERCC3P19447 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 MIR5100-201ENST00000579544 119 ntBASIC20.96■□□□□ 0.95
ERCC3P19447 AC120114.3-201ENST00000611923 658 ntBASIC20.96■□□□□ 0.95
ERCC3P19447 BX640515.1-201ENST00000617215 977 ntBASIC20.96■□□□□ 0.95
ERCC3P19447 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
ERCC3P19447 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
ERCC3P19447 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.96■□□□□ 0.95
ERCC3P19447 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ERCC3P19447 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC3P19447 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.95
ERCC3P19447 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ERCC3P19447 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.95■□□□□ 0.94
ERCC3P19447 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 MIR149-201ENST00000384879 89 ntBASIC20.95■□□□□ 0.94
ERCC3P19447 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.95■□□□□ 0.94
ERCC3P19447 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.95■□□□□ 0.94
ERCC3P19447 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ERCC3P19447 AL591684.3-201ENST00000605187 298 ntBASIC20.95■□□□□ 0.94
ERCC3P19447 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC3P19447 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC3P19447 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.95■□□□□ 0.94
ERCC3P19447 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms