Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.5■□□□□ 0.71
CD58P19256 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.5■□□□□ 0.71
CD58P19256 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.5■□□□□ 0.71
CD58P19256 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 AL031133.1-201ENST00000406807 723 ntBASIC19.5■□□□□ 0.71
CD58P19256 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CD58P19256 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.5■□□□□ 0.71
CD58P19256 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.5■□□□□ 0.71
CD58P19256 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.5■□□□□ 0.71
CD58P19256 AC024563.2-201ENST00000603282 481 ntBASIC19.5■□□□□ 0.71
CD58P19256 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CD58P19256 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.5■□□□□ 0.71
CD58P19256 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD58P19256 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.5■□□□□ 0.71
CD58P19256 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD58P19256 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 REXO1L9P-201ENST00000604264 2108 ntBASIC19.49■□□□□ 0.71
CD58P19256 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 AC090340.1-201ENST00000620778 4980 ntBASIC19.49■□□□□ 0.71
CD58P19256 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.49■□□□□ 0.71
CD58P19256 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.49■□□□□ 0.71
CD58P19256 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.49■□□□□ 0.71
CD58P19256 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.49■□□□□ 0.71
CD58P19256 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CD58P19256 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.49■□□□□ 0.71
CD58P19256 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.49■□□□□ 0.71
CD58P19256 ZNF444P1-201ENST00000559497 298 ntBASIC19.49■□□□□ 0.71
CD58P19256 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CD58P19256 AL445228.2-201ENST00000605589 952 ntBASIC19.49■□□□□ 0.71
CD58P19256 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.49■□□□□ 0.71
CD58P19256 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.49■□□□□ 0.71
CD58P19256 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD58P19256 AL162741.1-201ENST00000565563 1558 ntBASIC19.49■□□□□ 0.71
CD58P19256 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 AL096828.2-201ENST00000567259 1965 ntBASIC19.48■□□□□ 0.71
CD58P19256 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.48■□□□□ 0.71
CD58P19256 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.48■□□□□ 0.71
CD58P19256 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.48■□□□□ 0.71
CD58P19256 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.48■□□□□ 0.71
CD58P19256 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.48■□□□□ 0.71
CD58P19256 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.48■□□□□ 0.71
CD58P19256 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.48■□□□□ 0.71
CD58P19256 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CD58P19256 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CD58P19256 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.48■□□□□ 0.71
CD58P19256 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD58P19256 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CD58P19256 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.48■□□□□ 0.71
CD58P19256 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
CD58P19256 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CD58P19256 ABALON-201ENST00000629058 1903 ntBASIC19.47■□□□□ 0.71
CD58P19256 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.47■□□□□ 0.71
CD58P19256 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.47■□□□□ 0.71
CD58P19256 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.47■□□□□ 0.71
CD58P19256 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.47■□□□□ 0.71
CD58P19256 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.47■□□□□ 0.71
CD58P19256 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD58P19256 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms