Protein–RNA interactions for Protein: P15529

CD46, Membrane cofactor protein, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD46P15529 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD46P15529 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD46P15529 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD46P15529 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD46P15529 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD46P15529 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CD46P15529 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD46P15529 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD46P15529 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CD46P15529 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.52■□□□□ 0.24
CD46P15529 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD46P15529 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.52■□□□□ 0.24
CD46P15529 MTCL1P1-201ENST00000446207 792 ntBASIC16.52■□□□□ 0.24
CD46P15529 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.52■□□□□ 0.24
CD46P15529 AL662844.1-201ENST00000546340 181 ntBASIC16.52■□□□□ 0.24
CD46P15529 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.52■□□□□ 0.24
CD46P15529 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 MIR5100-201ENST00000579544 119 ntBASIC16.52■□□□□ 0.24
CD46P15529 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.52■□□□□ 0.24
CD46P15529 BNIP3P18-201ENST00000593976 575 ntBASIC16.52■□□□□ 0.24
CD46P15529 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.52■□□□□ 0.24
CD46P15529 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD46P15529 AC114341.1-201ENST00000618070 349 ntBASIC16.52■□□□□ 0.24
CD46P15529 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.52■□□□□ 0.24
CD46P15529 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD46P15529 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD46P15529 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD46P15529 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD46P15529 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD46P15529 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.52■□□□□ 0.23
CD46P15529 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD46P15529 GMCL1P1-201ENST00000463439 1581 ntBASIC16.51■□□□□ 0.23
CD46P15529 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CD46P15529 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CD46P15529 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.51■□□□□ 0.23
CD46P15529 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.51■□□□□ 0.23
CD46P15529 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.51■□□□□ 0.23
CD46P15529 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.51■□□□□ 0.23
CD46P15529 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD46P15529 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 KRT18P65-201ENST00000439811 1286 ntBASIC16.51■□□□□ 0.23
CD46P15529 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.51■□□□□ 0.23
CD46P15529 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.51■□□□□ 0.23
CD46P15529 AC009533.2-201ENST00000543664 586 ntBASIC16.51■□□□□ 0.23
CD46P15529 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.51■□□□□ 0.23
CD46P15529 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.51■□□□□ 0.23
CD46P15529 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.51■□□□□ 0.23
CD46P15529 AC104692.2-201ENST00000603054 253 ntBASIC16.51■□□□□ 0.23
CD46P15529 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.51■□□□□ 0.23
CD46P15529 REXO1L6P-202ENST00000619970 1078 ntBASIC16.51■□□□□ 0.23
CD46P15529 LINC01126-201ENST00000623515 1646 ntBASIC16.51■□□□□ 0.23
CD46P15529 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD46P15529 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD46P15529 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.5■□□□□ 0.23
CD46P15529 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.5■□□□□ 0.23
CD46P15529 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.5■□□□□ 0.23
CD46P15529 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.5■□□□□ 0.23
CD46P15529 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.5■□□□□ 0.23
CD46P15529 AP002469.2-201ENST00000531724 424 ntBASIC16.5■□□□□ 0.23
CD46P15529 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD46P15529 AC064862.7-201ENST00000604520 867 ntBASIC16.5■□□□□ 0.23
CD46P15529 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD46P15529 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD46P15529 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD46P15529 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms