Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC31.6■■■□□ 2.65
TOP2AP11388 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
TOP2AP11388 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC31.6■■■□□ 2.65
TOP2AP11388 AC002310.6-201ENST00000624451 1377 ntBASIC31.6■■■□□ 2.65
TOP2AP11388 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 ESPNP-201ENST00000270691 2015 ntBASIC31.6■■■□□ 2.65
TOP2AP11388 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TOP2AP11388 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC31.59■■■□□ 2.65
TOP2AP11388 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 AC027796.2-201ENST00000575326 344 ntBASIC31.59■■■□□ 2.65
TOP2AP11388 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 PGM5P2-202ENST00000637225 1043 ntBASIC31.59■■■□□ 2.65
TOP2AP11388 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
TOP2AP11388 GMCL1P1-201ENST00000463439 1581 ntBASIC31.59■■■□□ 2.65
TOP2AP11388 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC31.59■■■□□ 2.65
TOP2AP11388 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC31.59■■■□□ 2.65
TOP2AP11388 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC31.59■■■□□ 2.65
TOP2AP11388 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC31.59■■■□□ 2.65
TOP2AP11388 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 ADM-208ENST00000534464 1640 ntTSL 2 BASIC31.59■■■□□ 2.65
TOP2AP11388 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TOP2AP11388 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TOP2AP11388 MCCD1P2-201ENST00000423228 335 ntBASIC31.58■■■□□ 2.65
TOP2AP11388 PRYP5-201ENST00000451909 266 ntBASIC31.58■■■□□ 2.65
TOP2AP11388 AC108073.2-201ENST00000464002 357 ntBASIC31.58■■■□□ 2.65
TOP2AP11388 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TOP2AP11388 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
TOP2AP11388 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC31.57■■■□□ 2.65
TOP2AP11388 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
TOP2AP11388 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC31.57■■■□□ 2.65
TOP2AP11388 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC31.57■■■□□ 2.64
TOP2AP11388 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC31.57■■■□□ 2.64
TOP2AP11388 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
TOP2AP11388 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC31.57■■■□□ 2.64
TOP2AP11388 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
TOP2AP11388 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
TOP2AP11388 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
TOP2AP11388 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
TOP2AP11388 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
TOP2AP11388 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
TOP2AP11388 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TOP2AP11388 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TOP2AP11388 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
TOP2AP11388 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TOP2AP11388 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC31.55■■■□□ 2.64
TOP2AP11388 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC31.55■■■□□ 2.64
TOP2AP11388 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TOP2AP11388 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC31.55■■■□□ 2.64
TOP2AP11388 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC31.55■■■□□ 2.64
TOP2AP11388 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
TOP2AP11388 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TOP2AP11388 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC31.55■■■□□ 2.64
TOP2AP11388 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
TOP2AP11388 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC31.54■■■□□ 2.64
TOP2AP11388 KRT18P2-201ENST00000447938 1258 ntBASIC31.54■■■□□ 2.64
TOP2AP11388 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
TOP2AP11388 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC31.54■■■□□ 2.64
TOP2AP11388 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC31.54■■■□□ 2.64
TOP2AP11388 COX5A-206ENST00000568783 571 ntTSL 3 BASIC31.54■■■□□ 2.64
TOP2AP11388 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC31.54■■■□□ 2.64
TOP2AP11388 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC31.54■■■□□ 2.64
TOP2AP11388 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC31.54■■■□□ 2.64
TOP2AP11388 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC31.54■■■□□ 2.64
TOP2AP11388 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TOP2AP11388 MIR3687-2-201ENST00000577708 61 ntBASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms