Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 AP005901.3-202ENST00000581653 237 ntBASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 AC026471.1-201ENST00000564629 3026 ntBASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40ALP0C0E4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB40ALP0C0E4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 TSPY12P-201ENST00000421279 868 ntBASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AL121912.1-201ENST00000603683 238 ntBASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AL049812.1-201ENST00000432563 2267 ntBASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB40ALP0C0E4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms