Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.6■□□□□ 0.25
HTR1AP08908 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1AP08908 AC083880.1-201ENST00000608266 535 ntBASIC16.6■□□□□ 0.25
HTR1AP08908 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.6■□□□□ 0.25
HTR1AP08908 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.6■□□□□ 0.25
HTR1AP08908 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.6■□□□□ 0.25
HTR1AP08908 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1AP08908 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1AP08908 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.6■□□□□ 0.25
HTR1AP08908 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HTR1AP08908 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HTR1AP08908 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 KRT18P55-202ENST00000578578 1546 ntBASIC16.6■□□□□ 0.25
HTR1AP08908 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 AL355312.1-201ENST00000407115 2176 ntBASIC16.6■□□□□ 0.25
HTR1AP08908 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1AP08908 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HTR1AP08908 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 AGGF1P2-201ENST00000426656 2106 ntBASIC16.59■□□□□ 0.25
HTR1AP08908 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.59■□□□□ 0.25
HTR1AP08908 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1AP08908 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1AP08908 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1AP08908 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 HTR7P1-201ENST00000538670 1336 ntBASIC16.59■□□□□ 0.25
HTR1AP08908 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 AC105020.1-201ENST00000435356 2205 ntBASIC16.59■□□□□ 0.25
HTR1AP08908 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 KRT8P3-201ENST00000519669 1449 ntBASIC16.59■□□□□ 0.25
HTR1AP08908 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1AP08908 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1AP08908 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1AP08908 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.58■□□□□ 0.25
HTR1AP08908 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HTR1AP08908 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HTR1AP08908 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.58■□□□□ 0.25
HTR1AP08908 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HTR1AP08908 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1AP08908 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HTR1AP08908 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 POU5F1P3-201ENST00000428824 1078 ntBASIC16.58■□□□□ 0.24
HTR1AP08908 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 KRT18P41-201ENST00000518924 1277 ntBASIC16.58■□□□□ 0.24
HTR1AP08908 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1AP08908 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1AP08908 AL138781.1-201ENST00000566567 1274 ntBASIC16.58■□□□□ 0.24
HTR1AP08908 C1QL1P1-201ENST00000568105 661 ntBASIC16.58■□□□□ 0.24
HTR1AP08908 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1AP08908 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1AP08908 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HTR1AP08908 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HTR1AP08908 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HTR1AP08908 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
HTR1AP08908 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1AP08908 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HTR1AP08908 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1AP08908 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HTR1AP08908 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HTR1AP08908 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms