Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 KRT8P45-201ENST00000414328 1447 ntBASIC16.13■□□□□ 0.17
ERCC1P07992 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
ERCC1P07992 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.13■□□□□ 0.17
ERCC1P07992 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC1P07992 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
ERCC1P07992 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC1P07992 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC1P07992 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERCC1P07992 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ERCC1P07992 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ERCC1P07992 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.12■□□□□ 0.17
ERCC1P07992 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC1P07992 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 HOMER2P1-201ENST00000455653 964 ntBASIC16.12■□□□□ 0.17
ERCC1P07992 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC1P07992 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC1P07992 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC1P07992 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ERCC1P07992 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC1P07992 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC1P07992 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ERCC1P07992 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ERCC1P07992 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC1P07992 AC104076.2-201ENST00000448912 469 ntBASIC16.11■□□□□ 0.17
ERCC1P07992 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC1P07992 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERCC1P07992 AC022616.7-201ENST00000525383 220 ntBASIC16.11■□□□□ 0.17
ERCC1P07992 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.11■□□□□ 0.17
ERCC1P07992 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC1P07992 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.11■□□□□ 0.17
ERCC1P07992 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms