Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HMGN1P05114 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMGN1P05114 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGN1P05114 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.47■□□□□ 0.23
HMGN1P05114 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HMGN1P05114 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGN1P05114 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HMGN1P05114 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGN1P05114 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGN1P05114 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HMGN1P05114 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGN1P05114 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGN1P05114 AC036111.1-201ENST00000533973 1582 ntBASIC16.47■□□□□ 0.23
HMGN1P05114 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HMGN1P05114 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.46■□□□□ 0.23
HMGN1P05114 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 KRT8P7-201ENST00000533003 1432 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 ID1-201ENST00000376105 1233 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 MFAP1P1-201ENST00000442257 1255 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 AC128676.1-201ENST00000454392 318 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 RPPH1-201ENST00000516869 333 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.46■□□□□ 0.23
HMGN1P05114 AC009065.1-201ENST00000564055 1225 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 SLC25A1P4-201ENST00000567977 778 ntBASIC16.46■□□□□ 0.23
HMGN1P05114 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMGN1P05114 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGN1P05114 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
HMGN1P05114 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGN1P05114 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
HMGN1P05114 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMGN1P05114 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
HMGN1P05114 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
HMGN1P05114 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 HOXB1-202ENST00000577092 1414 ntBASIC16.45■□□□□ 0.22
HMGN1P05114 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGN1P05114 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HMGN1P05114 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGN1P05114 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGN1P05114 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGN1P05114 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGN1P05114 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms