Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRAP04437 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRAP04437 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRAP04437 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 AL023875.1-201ENST00000640777 796 ntBASIC13.85□□□□□ -0.19
TCRAP04437 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TCRAP04437 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TCRAP04437 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.84□□□□□ -0.19
TCRAP04437 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 AC011298.2-201ENST00000617989 482 ntBASIC13.84□□□□□ -0.19
TCRAP04437 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TCRAP04437 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TCRAP04437 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TCRAP04437 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRAP04437 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TCRAP04437 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRAP04437 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TCRAP04437 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 AC093010.1-201ENST00000473625 1624 ntBASIC13.83□□□□□ -0.2
TCRAP04437 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 MCCD1P1-208ENST00000445732 328 ntBASIC13.83□□□□□ -0.2
TCRAP04437 AP002982.1-201ENST00000492365 877 ntBASIC13.83□□□□□ -0.2
TCRAP04437 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 AP003097.1-201ENST00000530657 1135 ntBASIC13.83□□□□□ -0.2
TCRAP04437 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRAP04437 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 SDHAP2-201ENST00000455183 2001 ntBASIC13.83□□□□□ -0.2
TCRAP04437 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRAP04437 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRAP04437 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TCRAP04437 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TCRAP04437 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRAP04437 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRAP04437 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRAP04437 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms