Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.85■□□□□ 0.77
VTNP04004 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.85■□□□□ 0.77
VTNP04004 AL138831.2-201ENST00000606564 490 ntBASIC19.85■□□□□ 0.77
VTNP04004 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 TP73-AS1-207ENST00000624167 988 ntBASIC19.85■□□□□ 0.77
VTNP04004 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
VTNP04004 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.85■□□□□ 0.77
VTNP04004 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
VTNP04004 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTNP04004 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
VTNP04004 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.84■□□□□ 0.77
VTNP04004 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.84■□□□□ 0.77
VTNP04004 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VTNP04004 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
VTNP04004 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.84■□□□□ 0.77
VTNP04004 AC112698.1-201ENST00000510299 916 ntBASIC19.84■□□□□ 0.77
VTNP04004 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.84■□□□□ 0.77
VTNP04004 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.84■□□□□ 0.77
VTNP04004 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VTNP04004 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTNP04004 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
VTNP04004 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
VTNP04004 AC125634.1-201ENST00000438758 1403 ntBASIC19.84■□□□□ 0.77
VTNP04004 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.83■□□□□ 0.77
VTNP04004 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
VTNP04004 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
VTNP04004 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.83■□□□□ 0.77
VTNP04004 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VTNP04004 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.83■□□□□ 0.77
VTNP04004 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VTNP04004 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.83■□□□□ 0.77
VTNP04004 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.83■□□□□ 0.77
VTNP04004 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VTNP04004 AP000347.1-202ENST00000435868 847 ntBASIC19.83■□□□□ 0.77
VTNP04004 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VTNP04004 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.83■□□□□ 0.77
VTNP04004 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.83■□□□□ 0.77
VTNP04004 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
VTNP04004 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
VTNP04004 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
VTNP04004 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 AC073592.3-201ENST00000625118 1834 ntBASIC19.83■□□□□ 0.76
VTNP04004 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.83■□□□□ 0.76
VTNP04004 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VTNP04004 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.82■□□□□ 0.76
VTNP04004 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.82■□□□□ 0.76
VTNP04004 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 AC079776.4-201ENST00000511039 504 ntBASIC19.82■□□□□ 0.76
VTNP04004 AC009533.2-201ENST00000543664 586 ntBASIC19.82■□□□□ 0.76
VTNP04004 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VTNP04004 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 PHGDH-209ENST00000641074 1780 ntBASIC19.82■□□□□ 0.76
VTNP04004 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VTNP04004 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VTNP04004 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms