Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFP01375 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TNFP01375 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFP01375 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNFP01375 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNFP01375 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFP01375 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNFP01375 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFP01375 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFP01375 SAPCD2P3-201ENST00000455031 850 ntBASIC17.69■□□□□ 0.42
TNFP01375 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.69■□□□□ 0.42
TNFP01375 AC104692.2-201ENST00000603054 253 ntBASIC17.69■□□□□ 0.42
TNFP01375 AC114341.1-201ENST00000618070 349 ntBASIC17.69■□□□□ 0.42
TNFP01375 REXO1L6P-202ENST00000619970 1078 ntBASIC17.69■□□□□ 0.42
TNFP01375 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNFP01375 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 ESPNP-201ENST00000270691 2015 ntBASIC17.69■□□□□ 0.42
TNFP01375 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 TP73-AS1-210ENST00000637775 1455 ntBASIC17.69■□□□□ 0.42
TNFP01375 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFP01375 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFP01375 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFP01375 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFP01375 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFP01375 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFP01375 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFP01375 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFP01375 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 RCN1P2-201ENST00000398357 915 ntBASIC17.68■□□□□ 0.42
TNFP01375 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TNFP01375 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 AC112698.1-201ENST00000510299 916 ntBASIC17.68■□□□□ 0.42
TNFP01375 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.68■□□□□ 0.42
TNFP01375 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFP01375 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFP01375 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFP01375 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFP01375 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFP01375 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFP01375 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 AKR1C7P-201ENST00000305623 895 ntBASIC17.67■□□□□ 0.42
TNFP01375 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFP01375 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFP01375 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFP01375 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFP01375 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFP01375 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFP01375 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFP01375 AC073592.3-201ENST00000625118 1834 ntBASIC17.66■□□□□ 0.42
TNFP01375 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFP01375 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFP01375 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms