Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.17■□□□□ 0.34
CLPTM1O96005 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.17■□□□□ 0.34
CLPTM1O96005 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLPTM1O96005 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 MST1L-201ENST00000442552 2185 ntBASIC17.16■□□□□ 0.34
CLPTM1O96005 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLPTM1O96005 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.16■□□□□ 0.34
CLPTM1O96005 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 AC008687.6-201ENST00000596318 630 ntBASIC17.16■□□□□ 0.34
CLPTM1O96005 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.16■□□□□ 0.34
CLPTM1O96005 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 AL499627.1-201ENST00000569373 2188 ntBASIC17.16■□□□□ 0.34
CLPTM1O96005 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLPTM1O96005 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CLPTM1O96005 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.16■□□□□ 0.34
CLPTM1O96005 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 AC116351.2-201ENST00000606540 1585 ntBASIC17.15■□□□□ 0.34
CLPTM1O96005 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.15■□□□□ 0.34
CLPTM1O96005 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CLPTM1O96005 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.15■□□□□ 0.34
CLPTM1O96005 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.15■□□□□ 0.34
CLPTM1O96005 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.15■□□□□ 0.34
CLPTM1O96005 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.15■□□□□ 0.34
CLPTM1O96005 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CLPTM1O96005 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
CLPTM1O96005 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLPTM1O96005 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLPTM1O96005 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLPTM1O96005 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1O96005 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPTM1O96005 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1O96005 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1O96005 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1O96005 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1O96005 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms