Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB2O95900 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.03■□□□□ 0.64
TRUB2O95900 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB2O95900 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.03■□□□□ 0.64
TRUB2O95900 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRUB2O95900 AC008764.6-201ENST00000595909 2069 ntBASIC19.03■□□□□ 0.64
TRUB2O95900 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
TRUB2O95900 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB2O95900 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.03■□□□□ 0.64
TRUB2O95900 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 AC005332.1-201ENST00000577698 1310 ntBASIC19.02■□□□□ 0.64
TRUB2O95900 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.02■□□□□ 0.64
TRUB2O95900 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 AC068880.1-201ENST00000507289 2297 ntBASIC19.02■□□□□ 0.64
TRUB2O95900 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 AL645929.1-201ENST00000420084 975 ntBASIC19.02■□□□□ 0.64
TRUB2O95900 KRT18P48-201ENST00000434763 852 ntBASIC19.02■□□□□ 0.64
TRUB2O95900 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.02■□□□□ 0.64
TRUB2O95900 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.02■□□□□ 0.64
TRUB2O95900 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.02■□□□□ 0.64
TRUB2O95900 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.02■□□□□ 0.64
TRUB2O95900 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB2O95900 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.02■□□□□ 0.63
TRUB2O95900 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.02■□□□□ 0.63
TRUB2O95900 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRUB2O95900 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TRUB2O95900 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.02■□□□□ 0.63
TRUB2O95900 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRUB2O95900 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRUB2O95900 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.01■□□□□ 0.63
TRUB2O95900 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
TRUB2O95900 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.01■□□□□ 0.63
TRUB2O95900 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.01■□□□□ 0.63
TRUB2O95900 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRUB2O95900 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRUB2O95900 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRUB2O95900 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.01■□□□□ 0.63
TRUB2O95900 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.01■□□□□ 0.63
TRUB2O95900 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 KRT89P-201ENST00000620027 1478 ntBASIC19.01■□□□□ 0.63
TRUB2O95900 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRUB2O95900 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB2O95900 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 FLJ13224-201ENST00000313737 1514 ntBASIC19■□□□□ 0.63
TRUB2O95900 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 AC093010.1-201ENST00000473625 1624 ntBASIC19■□□□□ 0.63
TRUB2O95900 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRUB2O95900 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19■□□□□ 0.63
TRUB2O95900 PCED1CP-201ENST00000419887 785 ntBASIC19■□□□□ 0.63
TRUB2O95900 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19■□□□□ 0.63
TRUB2O95900 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19■□□□□ 0.63
TRUB2O95900 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRUB2O95900 DBP-204ENST00000599385 709 ntTSL 3 BASIC19■□□□□ 0.63
TRUB2O95900 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19■□□□□ 0.63
TRUB2O95900 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms