Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.95■■□□□ 1.42
LTN1O94822 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LTN1O94822 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.95■■□□□ 1.42
LTN1O94822 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LTN1O94822 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.94■■□□□ 1.42
LTN1O94822 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 FAM220CP-201ENST00000395253 831 ntBASIC23.94■■□□□ 1.42
LTN1O94822 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.94■■□□□ 1.42
LTN1O94822 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.94■■□□□ 1.42
LTN1O94822 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.94■■□□□ 1.42
LTN1O94822 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.94■■□□□ 1.42
LTN1O94822 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.94■■□□□ 1.42
LTN1O94822 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.94■■□□□ 1.42
LTN1O94822 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LTN1O94822 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.93■■□□□ 1.42
LTN1O94822 HMGN1P19-201ENST00000436976 333 ntBASIC23.93■■□□□ 1.42
LTN1O94822 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 AC092183.1-201ENST00000469884 875 ntBASIC23.93■■□□□ 1.42
LTN1O94822 AC122714.2-201ENST00000502787 707 ntBASIC23.93■■□□□ 1.42
LTN1O94822 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.93■■□□□ 1.42
LTN1O94822 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
LTN1O94822 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 AC009947.1-201ENST00000444350 727 ntBASIC23.93■■□□□ 1.42
LTN1O94822 AC108751.1-201ENST00000490852 363 ntBASIC23.93■■□□□ 1.42
LTN1O94822 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.93■■□□□ 1.42
LTN1O94822 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LTN1O94822 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LTN1O94822 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
LTN1O94822 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.92■■□□□ 1.42
LTN1O94822 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LTN1O94822 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LTN1O94822 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LTN1O94822 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LTN1O94822 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.92■■□□□ 1.42
LTN1O94822 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
LTN1O94822 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.92■■□□□ 1.42
LTN1O94822 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.92■■□□□ 1.42
LTN1O94822 AP000867.4-201ENST00000641616 219 ntBASIC23.92■■□□□ 1.42
LTN1O94822 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.91■■□□□ 1.42
LTN1O94822 KRT18P3-201ENST00000451602 1288 ntBASIC23.91■■□□□ 1.42
LTN1O94822 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
LTN1O94822 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
LTN1O94822 MIR1199-201ENST00000621445 119 ntBASIC23.91■■□□□ 1.42
LTN1O94822 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LTN1O94822 RNA5SP416-201ENST00000516838 111 ntBASIC23.91■■□□□ 1.42
LTN1O94822 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.91■■□□□ 1.42
LTN1O94822 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.91■■□□□ 1.42
LTN1O94822 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LTN1O94822 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LTN1O94822 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LTN1O94822 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.9■■□□□ 1.42
LTN1O94822 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LTN1O94822 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LTN1O94822 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.9■■□□□ 1.42
LTN1O94822 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.9■■□□□ 1.42
LTN1O94822 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.9■■□□□ 1.42
LTN1O94822 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms