Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC138028.4-201ENST00000564984 1845 ntBASIC18.02■□□□□ 0.48
SUPT3HO75486 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SUPT3HO75486 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.02■□□□□ 0.48
SUPT3HO75486 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.02■□□□□ 0.48
SUPT3HO75486 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.02■□□□□ 0.48
SUPT3HO75486 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 FITM1-202ENST00000559294 800 ntBASIC18.02■□□□□ 0.48
SUPT3HO75486 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 AC067852.2-201ENST00000590513 2313 ntBASIC18.02■□□□□ 0.48
SUPT3HO75486 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.02■□□□□ 0.48
SUPT3HO75486 CR769767.2-201ENST00000622735 460 ntBASIC18.02■□□□□ 0.48
SUPT3HO75486 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SUPT3HO75486 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT3HO75486 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.02■□□□□ 0.47
SUPT3HO75486 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUPT3HO75486 AL163051.1-201ENST00000569214 1512 ntBASIC18.02■□□□□ 0.47
SUPT3HO75486 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
SUPT3HO75486 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SUPT3HO75486 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
SUPT3HO75486 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SUPT3HO75486 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUPT3HO75486 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUPT3HO75486 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.02■□□□□ 0.47
SUPT3HO75486 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 AC009102.3-201ENST00000623118 1491 ntBASIC18.01■□□□□ 0.47
SUPT3HO75486 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.01■□□□□ 0.47
SUPT3HO75486 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
SUPT3HO75486 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.01■□□□□ 0.47
SUPT3HO75486 AP006294.2-201ENST00000641667 209 ntBASIC18.01■□□□□ 0.47
SUPT3HO75486 AC116562.4-202ENST00000641738 218 ntBASIC18.01■□□□□ 0.47
SUPT3HO75486 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.01■□□□□ 0.47
SUPT3HO75486 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.01■□□□□ 0.47
SUPT3HO75486 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.01■□□□□ 0.47
SUPT3HO75486 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SUPT3HO75486 AL096828.2-201ENST00000567259 1965 ntBASIC18■□□□□ 0.47
SUPT3HO75486 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18■□□□□ 0.47
SUPT3HO75486 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
SUPT3HO75486 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 MIR149-201ENST00000384879 89 ntBASIC18■□□□□ 0.47
SUPT3HO75486 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18■□□□□ 0.47
SUPT3HO75486 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
SUPT3HO75486 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18■□□□□ 0.47
SUPT3HO75486 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 BX088651.1-201ENST00000540551 451 ntBASIC18■□□□□ 0.47
SUPT3HO75486 C2orf69P3-201ENST00000565542 1120 ntBASIC18■□□□□ 0.47
SUPT3HO75486 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18■□□□□ 0.47
SUPT3HO75486 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18■□□□□ 0.47
SUPT3HO75486 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms