Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.63■□□□□ 0.41
CNOT3O75175 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
CNOT3O75175 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT3O75175 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT3O75175 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT3O75175 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.63■□□□□ 0.41
CNOT3O75175 AC116407.4-201ENST00000623319 1061 ntBASIC17.63■□□□□ 0.41
CNOT3O75175 AC008556.1-201ENST00000610908 2040 ntBASIC17.63■□□□□ 0.41
CNOT3O75175 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.63■□□□□ 0.41
CNOT3O75175 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT3O75175 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT3O75175 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT3O75175 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT3O75175 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.62■□□□□ 0.41
CNOT3O75175 RASA4DP-201ENST00000460726 1199 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT3O75175 SEC1P-202ENST00000473944 940 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 AC092597.1-201ENST00000487352 616 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.62■□□□□ 0.41
CNOT3O75175 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 ZNF444P1-201ENST00000559497 298 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 AL136038.3-201ENST00000561909 1096 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.62■□□□□ 0.41
CNOT3O75175 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CNOT3O75175 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT3O75175 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.62■□□□□ 0.41
CNOT3O75175 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 IER3-202ENST00000376377 1350 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.62■□□□□ 0.41
CNOT3O75175 LINC01311-201ENST00000565162 1445 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNOT3O75175 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.62■□□□□ 0.41
CNOT3O75175 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNOT3O75175 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT3O75175 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT3O75175 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNOT3O75175 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CNOT3O75175 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT3O75175 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT3O75175 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT3O75175 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 AL109659.2-201ENST00000606809 1674 ntBASIC17.61■□□□□ 0.41
CNOT3O75175 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNOT3O75175 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNOT3O75175 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT3O75175 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT3O75175 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 HBZP1-201ENST00000354915 429 ntBASIC17.6■□□□□ 0.41
CNOT3O75175 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms