Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.7■□□□□ 0.58
TSPAN3O60637 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.7■□□□□ 0.58
TSPAN3O60637 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 HTR7P1-202ENST00000624664 4411 ntBASIC18.7■□□□□ 0.58
TSPAN3O60637 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN3O60637 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TSPAN3O60637 AC233702.3-201ENST00000578656 1387 ntBASIC18.69■□□□□ 0.58
TSPAN3O60637 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN3O60637 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN3O60637 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TSPAN3O60637 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN3O60637 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.69■□□□□ 0.58
TSPAN3O60637 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN3O60637 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.69■□□□□ 0.58
TSPAN3O60637 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.69■□□□□ 0.58
TSPAN3O60637 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TSPAN3O60637 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN3O60637 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TSPAN3O60637 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.69■□□□□ 0.58
TSPAN3O60637 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
TSPAN3O60637 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 AC104819.1-201ENST00000504587 486 ntBASIC18.68■□□□□ 0.58
TSPAN3O60637 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.68■□□□□ 0.58
TSPAN3O60637 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN3O60637 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN3O60637 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN3O60637 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.67■□□□□ 0.58
TSPAN3O60637 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TSPAN3O60637 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.67■□□□□ 0.58
TSPAN3O60637 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 AL845331.1-201ENST00000424978 1190 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 FOSL1P1-201ENST00000511041 816 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.67■□□□□ 0.58
TSPAN3O60637 AC012615.1-201ENST00000565797 1299 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 AC011840.4-201ENST00000578471 627 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 AP005901.3-202ENST00000581653 237 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.67■□□□□ 0.58
TSPAN3O60637 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TSPAN3O60637 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 AC073592.3-201ENST00000625118 1834 ntBASIC18.67■□□□□ 0.58
TSPAN3O60637 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
TSPAN3O60637 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN3O60637 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TSPAN3O60637 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN3O60637 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms