Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA3O60609 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GFRA3O60609 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA3O60609 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA3O60609 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.54■□□□□ 0.4
GFRA3O60609 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GFRA3O60609 SLC25A39P2-201ENST00000537614 270 ntBASIC17.54■□□□□ 0.4
GFRA3O60609 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.54■□□□□ 0.4
GFRA3O60609 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.54■□□□□ 0.4
GFRA3O60609 AC007064.4-201ENST00000637740 555 ntBASIC17.54■□□□□ 0.4
GFRA3O60609 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.54■□□□□ 0.4
GFRA3O60609 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
GFRA3O60609 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GFRA3O60609 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA3O60609 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA3O60609 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.53■□□□□ 0.4
GFRA3O60609 PMPCAP1-201ENST00000508114 1576 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.53■□□□□ 0.4
GFRA3O60609 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 AL627223.1-201ENST00000416693 442 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.53■□□□□ 0.4
GFRA3O60609 KLF2P3-201ENST00000451977 1087 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 AL512638.1-201ENST00000457493 794 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.53■□□□□ 0.4
GFRA3O60609 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 AL662799.1-202ENST00000614205 422 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 AP001002.2-201ENST00000625137 386 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA3O60609 AF106564.1-201ENST00000607058 2553 ntBASIC17.53■□□□□ 0.4
GFRA3O60609 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
GFRA3O60609 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA3O60609 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
GFRA3O60609 AL163051.1-201ENST00000569214 1512 ntBASIC17.52■□□□□ 0.4
GFRA3O60609 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
GFRA3O60609 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 TUBB3P1-201ENST00000405796 1332 ntBASIC17.52■□□□□ 0.4
GFRA3O60609 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA3O60609 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.52■□□□□ 0.4
GFRA3O60609 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
GFRA3O60609 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA3O60609 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA3O60609 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.52■□□□□ 0.4
GFRA3O60609 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
GFRA3O60609 AC023141.13-201ENST00000604991 943 ntBASIC17.52■□□□□ 0.4
GFRA3O60609 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GFRA3O60609 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.52■□□□□ 0.39
GFRA3O60609 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.52■□□□□ 0.39
GFRA3O60609 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFRA3O60609 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
GFRA3O60609 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
GFRA3O60609 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
GFRA3O60609 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFRA3O60609 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.52■□□□□ 0.39
GFRA3O60609 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GFRA3O60609 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA3O60609 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 AC107890.1-201ENST00000422478 521 ntBASIC17.51■□□□□ 0.39
GFRA3O60609 RHOQP3-201ENST00000437982 621 ntBASIC17.51■□□□□ 0.39
GFRA3O60609 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA3O60609 IGHV3-42-201ENST00000520410 361 ntBASIC17.51■□□□□ 0.39
GFRA3O60609 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms