Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PEX1O43933 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.73■□□□□ 0.43
PEX1O43933 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.73■□□□□ 0.43
PEX1O43933 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.73■□□□□ 0.43
PEX1O43933 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.73■□□□□ 0.43
PEX1O43933 AC145285.6-201ENST00000604632 637 ntBASIC17.73■□□□□ 0.43
PEX1O43933 DGCR10-201ENST00000609839 495 ntBASIC17.73■□□□□ 0.43
PEX1O43933 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 LINC01568-207ENST00000641790 1380 ntBASIC17.73■□□□□ 0.43
PEX1O43933 CYP2D8P-201ENST00000433633 1490 ntBASIC17.73■□□□□ 0.43
PEX1O43933 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PEX1O43933 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.73■□□□□ 0.43
PEX1O43933 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.73■□□□□ 0.43
PEX1O43933 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.73■□□□□ 0.43
PEX1O43933 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PEX1O43933 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PEX1O43933 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PEX1O43933 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PEX1O43933 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PEX1O43933 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.72■□□□□ 0.43
PEX1O43933 AC097488.1-201ENST00000507834 756 ntBASIC17.72■□□□□ 0.43
PEX1O43933 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.72■□□□□ 0.43
PEX1O43933 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.72■□□□□ 0.43
PEX1O43933 AC130371.2-201ENST00000619443 611 ntBASIC17.72■□□□□ 0.43
PEX1O43933 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
PEX1O43933 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PEX1O43933 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
PEX1O43933 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PEX1O43933 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.72■□□□□ 0.43
PEX1O43933 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PEX1O43933 RCC2P6-201ENST00000526625 1557 ntBASIC17.71■□□□□ 0.43
PEX1O43933 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PEX1O43933 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
PEX1O43933 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PEX1O43933 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PEX1O43933 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 AC004951.3-201ENST00000418645 1148 ntBASIC17.71■□□□□ 0.43
PEX1O43933 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.71■□□□□ 0.43
PEX1O43933 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
PEX1O43933 AC011298.2-201ENST00000617989 482 ntBASIC17.71■□□□□ 0.43
PEX1O43933 AC010947.1-201ENST00000623454 693 ntBASIC17.71■□□□□ 0.43
PEX1O43933 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PEX1O43933 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PEX1O43933 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.71■□□□□ 0.43
PEX1O43933 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PEX1O43933 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PEX1O43933 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PEX1O43933 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
PEX1O43933 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PEX1O43933 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PEX1O43933 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PEX1O43933 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PEX1O43933 CRYGFP-201ENST00000418459 633 ntBASIC17.7■□□□□ 0.42
PEX1O43933 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.7■□□□□ 0.42
PEX1O43933 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.7■□□□□ 0.42
PEX1O43933 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms