Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 B3GAT3P1-201ENST00000471720 806 ntBASIC16.7■□□□□ 0.26
IDH3BO43837 AC011506.1-201ENST00000474329 610 ntBASIC16.7■□□□□ 0.26
IDH3BO43837 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.7■□□□□ 0.26
IDH3BO43837 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 AP000692.2-201ENST00000608391 879 ntBASIC16.7■□□□□ 0.26
IDH3BO43837 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
IDH3BO43837 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
IDH3BO43837 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IDH3BO43837 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 AL135905.2-201ENST00000584934 1404 ntBASIC16.7■□□□□ 0.26
IDH3BO43837 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IDH3BO43837 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
IDH3BO43837 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.69■□□□□ 0.26
IDH3BO43837 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
IDH3BO43837 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.69■□□□□ 0.26
IDH3BO43837 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IDH3BO43837 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
IDH3BO43837 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IDH3BO43837 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
IDH3BO43837 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IDH3BO43837 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IDH3BO43837 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IDH3BO43837 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.68■□□□□ 0.26
IDH3BO43837 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.68■□□□□ 0.26
IDH3BO43837 CD99P1-205ENST00000527459 561 ntBASIC16.68■□□□□ 0.26
IDH3BO43837 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.68■□□□□ 0.26
IDH3BO43837 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
IDH3BO43837 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.68■□□□□ 0.26
IDH3BO43837 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 AC008556.1-201ENST00000610908 2040 ntBASIC16.68■□□□□ 0.26
IDH3BO43837 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IDH3BO43837 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.68■□□□□ 0.26
IDH3BO43837 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
IDH3BO43837 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms