Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS4O43181 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NDUFS4O43181 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 AL096828.2-201ENST00000567259 1965 ntBASIC17.4■□□□□ 0.38
NDUFS4O43181 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
NDUFS4O43181 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NDUFS4O43181 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFS4O43181 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.4■□□□□ 0.38
NDUFS4O43181 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFS4O43181 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFS4O43181 REXO1L9P-201ENST00000604264 2108 ntBASIC17.4■□□□□ 0.38
NDUFS4O43181 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFS4O43181 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NDUFS4O43181 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS4O43181 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS4O43181 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NDUFS4O43181 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NDUFS4O43181 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS4O43181 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
NDUFS4O43181 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.39■□□□□ 0.38
NDUFS4O43181 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NDUFS4O43181 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS4O43181 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS4O43181 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 AL031133.1-201ENST00000406807 723 ntBASIC17.39■□□□□ 0.37
NDUFS4O43181 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS4O43181 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NDUFS4O43181 KRT18P35-201ENST00000510488 1269 ntBASIC17.39■□□□□ 0.37
NDUFS4O43181 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS4O43181 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NDUFS4O43181 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS4O43181 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS4O43181 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.39■□□□□ 0.37
NDUFS4O43181 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS4O43181 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS4O43181 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS4O43181 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NDUFS4O43181 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS4O43181 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS4O43181 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NDUFS4O43181 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS4O43181 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS4O43181 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NDUFS4O43181 KRT18P48-201ENST00000434763 852 ntBASIC17.38■□□□□ 0.37
NDUFS4O43181 SPDYE13P-201ENST00000445314 798 ntBASIC17.38■□□□□ 0.37
NDUFS4O43181 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS4O43181 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.38■□□□□ 0.37
NDUFS4O43181 AL445228.2-201ENST00000605589 952 ntBASIC17.38■□□□□ 0.37
NDUFS4O43181 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS4O43181 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS4O43181 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS4O43181 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NDUFS4O43181 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms