Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
RRP8O43159 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.03■□□□□ 0.32
RRP8O43159 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.03■□□□□ 0.32
RRP8O43159 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 AC116562.4-201ENST00000641316 2276 ntBASIC17.03■□□□□ 0.32
RRP8O43159 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RRP8O43159 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
RRP8O43159 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 AC125437.2-201ENST00000625180 2167 ntBASIC17.02■□□□□ 0.32
RRP8O43159 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.02■□□□□ 0.32
RRP8O43159 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
RRP8O43159 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RRP8O43159 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.02■□□□□ 0.32
RRP8O43159 FAM8A3P-201ENST00000427218 844 ntBASIC17.02■□□□□ 0.32
RRP8O43159 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.02■□□□□ 0.32
RRP8O43159 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.02■□□□□ 0.32
RRP8O43159 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 AC005829.1-201ENST00000570002 483 ntBASIC17.02■□□□□ 0.32
RRP8O43159 AC011467.2-201ENST00000598425 242 ntBASIC17.02■□□□□ 0.32
RRP8O43159 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.02■□□□□ 0.32
RRP8O43159 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.02■□□□□ 0.32
RRP8O43159 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.02■□□□□ 0.32
RRP8O43159 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.02■□□□□ 0.32
RRP8O43159 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RRP8O43159 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.02■□□□□ 0.31
RRP8O43159 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.02■□□□□ 0.31
RRP8O43159 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RRP8O43159 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RRP8O43159 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RRP8O43159 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RRP8O43159 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RRP8O43159 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.31
RRP8O43159 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.01■□□□□ 0.31
RRP8O43159 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 AC138932.1-201ENST00000534164 6830 ntBASIC17.01■□□□□ 0.31
RRP8O43159 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RRP8O43159 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RRP8O43159 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RRP8O43159 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.01■□□□□ 0.31
RRP8O43159 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.01■□□□□ 0.31
RRP8O43159 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.01■□□□□ 0.31
RRP8O43159 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.01■□□□□ 0.31
RRP8O43159 AC025062.2-201ENST00000605477 670 ntBASIC17.01■□□□□ 0.31
RRP8O43159 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RRP8O43159 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.01■□□□□ 0.31
RRP8O43159 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RRP8O43159 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.01■□□□□ 0.31
RRP8O43159 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
RRP8O43159 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17■□□□□ 0.31
RRP8O43159 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17■□□□□ 0.31
RRP8O43159 LBX2-AS1-202ENST00000603175 2083 ntBASIC17■□□□□ 0.31
RRP8O43159 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RRP8O43159 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RRP8O43159 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17■□□□□ 0.31
RRP8O43159 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17■□□□□ 0.31
RRP8O43159 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 AC068472.1-201ENST00000474589 881 ntBASIC17■□□□□ 0.31
RRP8O43159 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17■□□□□ 0.31
RRP8O43159 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17■□□□□ 0.31
RRP8O43159 AC011467.4-201ENST00000594891 528 ntBASIC17■□□□□ 0.31
RRP8O43159 MTDHP4-201ENST00000600287 670 ntBASIC17■□□□□ 0.31
RRP8O43159 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RRP8O43159 MIR1199-201ENST00000621445 119 ntBASIC17■□□□□ 0.31
RRP8O43159 AC107918.4-202ENST00000641623 219 ntBASIC17■□□□□ 0.31
RRP8O43159 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RRP8O43159 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RRP8O43159 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms