Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC3O15379 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
HDAC3O15379 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC3O15379 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC3O15379 LINC01126-201ENST00000623515 1646 ntBASIC17.69■□□□□ 0.42
HDAC3O15379 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC3O15379 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HDAC3O15379 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC3O15379 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.68■□□□□ 0.42
HDAC3O15379 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC3O15379 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC3O15379 HLA-L-209ENST00000420110 1011 ntBASIC17.68■□□□□ 0.42
HDAC3O15379 CA15P1-201ENST00000481698 905 ntBASIC17.68■□□□□ 0.42
HDAC3O15379 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC3O15379 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC3O15379 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC3O15379 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.68■□□□□ 0.42
HDAC3O15379 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC3O15379 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HDAC3O15379 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HDAC3O15379 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HDAC3O15379 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HDAC3O15379 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HDAC3O15379 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC3O15379 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 MFAP1P1-201ENST00000442257 1255 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 AC090192.1-201ENST00000517740 490 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC3O15379 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.67■□□□□ 0.42
HDAC3O15379 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HDAC3O15379 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 AL355312.1-201ENST00000407115 2176 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 AP001094.4-201ENST00000579008 2176 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC3O15379 AC106820.2-201ENST00000563775 3264 ntBASIC17.67■□□□□ 0.42
HDAC3O15379 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC3O15379 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC3O15379 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 KRT8P7-201ENST00000533003 1432 ntBASIC17.66■□□□□ 0.42
HDAC3O15379 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.66■□□□□ 0.42
HDAC3O15379 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.66■□□□□ 0.42
HDAC3O15379 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HDAC3O15379 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC3O15379 AC006058.3-201ENST00000606217 1069 ntBASIC17.66■□□□□ 0.42
HDAC3O15379 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 DGCR10-201ENST00000609839 495 ntBASIC17.66■□□□□ 0.42
HDAC3O15379 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.66■□□□□ 0.42
HDAC3O15379 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC3O15379 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms