Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMAD9O15198 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 AL138781.2-201ENST00000617896 1843 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SMAD9O15198 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.5■□□□□ 0.23
SMAD9O15198 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 RASA4DP-201ENST00000460726 1199 ntBASIC16.5■□□□□ 0.23
SMAD9O15198 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SMAD9O15198 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 AC126763.1-201ENST00000552015 2118 ntBASIC16.5■□□□□ 0.23
SMAD9O15198 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SMAD9O15198 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD9O15198 AL163051.1-201ENST00000569214 1512 ntBASIC16.5■□□□□ 0.23
SMAD9O15198 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.5■□□□□ 0.23
SMAD9O15198 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD9O15198 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD9O15198 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD9O15198 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD9O15198 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD9O15198 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD9O15198 LINC01238-205ENST00000567549 1107 ntBASIC16.49■□□□□ 0.23
SMAD9O15198 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD9O15198 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD9O15198 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD9O15198 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD9O15198 WIZP1-201ENST00000531444 2299 ntBASIC16.49■□□□□ 0.23
SMAD9O15198 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD9O15198 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMAD9O15198 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD9O15198 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD9O15198 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD9O15198 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD9O15198 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms