Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.34■□□□□ 0.37
RTCAO00442 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.34■□□□□ 0.37
RTCAO00442 STARP1-201ENST00000397973 869 ntBASIC17.34■□□□□ 0.37
RTCAO00442 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.34■□□□□ 0.37
RTCAO00442 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
RTCAO00442 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.34■□□□□ 0.37
RTCAO00442 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.34■□□□□ 0.37
RTCAO00442 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTCAO00442 AL391807.1-203ENST00000604392 2365 ntBASIC17.33■□□□□ 0.37
RTCAO00442 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.33■□□□□ 0.37
RTCAO00442 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTCAO00442 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTCAO00442 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTCAO00442 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTCAO00442 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.33■□□□□ 0.36
RTCAO00442 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTCAO00442 AL136038.4-201ENST00000603606 1261 ntBASIC17.33■□□□□ 0.36
RTCAO00442 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.33■□□□□ 0.36
RTCAO00442 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.33■□□□□ 0.36
RTCAO00442 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.33■□□□□ 0.36
RTCAO00442 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTCAO00442 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.33■□□□□ 0.36
RTCAO00442 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTCAO00442 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTCAO00442 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTCAO00442 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 AC092647.4-201ENST00000457211 535 ntBASIC17.32■□□□□ 0.36
RTCAO00442 DUX4L26-201ENST00000489078 1255 ntBASIC17.32■□□□□ 0.36
RTCAO00442 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.32■□□□□ 0.36
RTCAO00442 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTCAO00442 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
RTCAO00442 AP000997.3-201ENST00000623333 2250 ntBASIC17.32■□□□□ 0.36
RTCAO00442 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTCAO00442 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTCAO00442 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.31■□□□□ 0.36
RTCAO00442 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTCAO00442 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 AC138028.4-201ENST00000564984 1845 ntBASIC17.31■□□□□ 0.36
RTCAO00442 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
RTCAO00442 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms