Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP99D6REC4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP99D6REC4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP99D6REC4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 AL136038.4-201ENST00000603606 1261 ntBASIC18.12■□□□□ 0.49
CFAP99D6REC4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP99D6REC4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP99D6REC4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.11■□□□□ 0.49
CFAP99D6REC4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AL590326.2-201ENST00000625139 305 ntBASIC18.11■□□□□ 0.49
CFAP99D6REC4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AL162741.1-201ENST00000565563 1558 ntBASIC18.11■□□□□ 0.49
CFAP99D6REC4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP99D6REC4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP99D6REC4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 AC112907.2-201ENST00000448639 330 ntBASIC18.1■□□□□ 0.49
CFAP99D6REC4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.1■□□□□ 0.49
CFAP99D6REC4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CFAP99D6REC4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms