Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 AC131212.4-201ENST00000623606 975 ntBASIC19.42■□□□□ 0.7
CTAGE9A4FU28 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 AL121761.2-201ENST00000598007 1648 ntBASIC19.42■□□□□ 0.7
CTAGE9A4FU28 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
CTAGE9A4FU28 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 AL445675.2-201ENST00000620291 557 ntBASIC19.41■□□□□ 0.7
CTAGE9A4FU28 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.41■□□□□ 0.7
CTAGE9A4FU28 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 MIR564-202ENST00000385049 94 ntBASIC19.4■□□□□ 0.7
CTAGE9A4FU28 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTAGE9A4FU28 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.39■□□□□ 0.7
CTAGE9A4FU28 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CTAGE9A4FU28 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CTAGE9A4FU28 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.39■□□□□ 0.7
CTAGE9A4FU28 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 ID1-201ENST00000376105 1233 ntBASIC19.39■□□□□ 0.69
CTAGE9A4FU28 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTAGE9A4FU28 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms