Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 AC113347.1-201ENST00000413321 391 ntBASIC16.62■□□□□ 0.25
ZC3H12DA2A288 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 NEK4P2-201ENST00000580004 1012 ntBASIC16.62■□□□□ 0.25
ZC3H12DA2A288 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 AC010240.3-201ENST00000607688 395 ntBASIC16.62■□□□□ 0.25
ZC3H12DA2A288 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ZC3H12DA2A288 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
ZC3H12DA2A288 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TERF1P1-201ENST00000311003 1181 ntBASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 MIR149-201ENST00000384879 89 ntBASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 LIN28AP1-201ENST00000429574 405 ntBASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 AL023973.1-201ENST00000624619 620 ntBASIC16.61■□□□□ 0.25
ZC3H12DA2A288 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZC3H12DA2A288 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.6■□□□□ 0.25
ZC3H12DA2A288 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms