Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 AC009102.3-201ENST00000623118 1491 ntBASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 CKBP1-201ENST00000565489 1086 ntBASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRDV1A0A1B0GX56 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 AC004980.1-204ENST00000429707 299 ntBASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.97■□□□□ 0.15
TRDV1A0A1B0GX56 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.96■□□□□ 0.15
TRDV1A0A1B0GX56 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms