Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 MIR5100-201ENST00000579544 119 ntBASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 AC125634.1-201ENST00000438758 1403 ntBASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AC096582.2-201ENST00000510860 516 ntBASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AC114341.1-201ENST00000618070 349 ntBASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AC093677.2-201ENST00000600169 1863 ntBASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 TP73-AS1-210ENST00000637775 1455 ntBASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
SMIM28A0A1B0GU29 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 RCN1P2-201ENST00000398357 915 ntBASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM28A0A1B0GU29 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SMIM28A0A1B0GU29 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM28A0A1B0GU29 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM28A0A1B0GU29 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.39■□□□□ 0.7
SMIM28A0A1B0GU29 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC135776.1-201ENST00000319817 2481 ntBASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC009533.2-201ENST00000543664 586 ntBASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AL591684.3-201ENST00000605187 298 ntBASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM28A0A1B0GU29 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms