Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC012317.2-201ENST00000623305 2251 ntBASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL158047.1-201ENST00000445918 881 ntBASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC098590.1-201ENST00000468126 897 ntBASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 KRT8P45-201ENST00000414328 1447 ntBASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 DGCR10-201ENST00000609839 495 ntBASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF103-CHMP3A0A140T963 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF103-CHMP3A0A140T963 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 NUDT16P1-203ENST00000513809 620 ntBASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 SLC25A1P4-201ENST00000567977 778 ntBASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC096733.2-201ENST00000609937 1394 ntBASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF103-CHMP3A0A140T963 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms