Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
IGKV3D-7A0A0C4DH55 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 RASSF1-AS1-201ENST00000629828 790 ntBASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 POU5F1P4-201ENST00000413175 1085 ntBASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 DUX4L19-201ENST00000557448 1267 ntBASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 AC008175.2-201ENST00000612840 297 ntBASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
IGKV3D-7A0A0C4DH55 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms