Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 MIR1199-201ENST00000621445 119 ntBASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LOC102724428A0A0B4J2F2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
LOC102724428A0A0B4J2F2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC211486.1-202ENST00000416371 468 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 KRT18P2-201ENST00000447938 1258 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC211476.1-201ENST00000503899 468 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC006557.2-201ENST00000592985 1240 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC005593.1-201ENST00000624894 515 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC005082.1-201ENST00000413042 2259 ntBASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LOC102724428A0A0B4J2F2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 TBC1D3P5-201ENST00000579401 1545 ntBASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LOC102724428A0A0B4J2F2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC108751.1-201ENST00000490852 363 ntBASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 AD001527.2-201ENST00000622994 785 ntBASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 PGM5P2-202ENST00000637225 1043 ntBASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.99■■□□□ 1.27
LOC102724428A0A0B4J2F2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 AC132938.6-201ENST00000623828 1655 ntBASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 MCCD1P2-201ENST00000423228 335 ntBASIC22.98■■□□□ 1.27
LOC102724428A0A0B4J2F2 PRYP5-201ENST00000451909 266 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms