Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 UNC93B2-201ENST00000285383 730 ntBASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC099398.1-201ENST00000567919 2776 ntBASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-3A0A0A0MS03 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 AL158047.1-201ENST00000445918 881 ntBASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC022211.2-201ENST00000585075 2527 ntBASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-3A0A0A0MS03 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 AP000525.1-201ENST00000608286 694 ntBASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC010653.2-201ENST00000623505 997 ntBASIC16.98■□□□□ 0.31
TRBV5-3A0A0A0MS03 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms