Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 AP000867.4-201ENST00000641616 219 ntBASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.82■□□□□ 0.76
SCN10AQ9Y5Y9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 KRT18P3-201ENST00000451602 1288 ntBASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AC073621.1-201ENST00000392730 636 ntBASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AC122714.2-201ENST00000502787 707 ntBASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SCN10AQ9Y5Y9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 AC040169.1-201ENST00000565382 521 ntBASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 AD001527.2-201ENST00000622994 785 ntBASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN10AQ9Y5Y9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 GPX1P2-201ENST00000429271 606 ntBASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SCN10AQ9Y5Y9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 HMGN1P19-201ENST00000436976 333 ntBASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 AC009947.1-201ENST00000444350 727 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms