Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 MIR3180-1-201ENST00000580374 94 ntBASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 MIR3180-3-201ENST00000584616 94 ntBASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 AC092329.2-201ENST00000598402 547 ntBASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 AC124864.1-201ENST00000623408 392 ntBASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX9Q9Y5X1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 TSPY12P-201ENST00000421279 868 ntBASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 AL592071.1-201ENST00000611956 408 ntBASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX9Q9Y5X1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 AC135776.1-201ENST00000319817 2481 ntBASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 KRT18P56-201ENST00000507275 550 ntBASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SNX9Q9Y5X1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 AC138932.1-201ENST00000534164 6830 ntBASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 RN7SL606P-201ENST00000472779 293 ntBASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 TPSP2-201ENST00000561760 610 ntBASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms