Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HOXB1-202ENST00000577092 1414 ntBASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AL391807.1-203ENST00000604392 2365 ntBASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 PRELID1P1-202ENST00000567272 903 ntBASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA6Q9Y5G7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 AP002383.4-201ENST00000442518 975 ntBASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA6Q9Y5G7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA6Q9Y5G7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 AC104390.1-201ENST00000555663 520 ntBASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms