Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 AC011676.5-201ENST00000624864 2660 ntBASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 ZNF815P-204ENST00000434898 1737 ntBASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 NKILA-202ENST00000614771 2598 ntBASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3HCC1Q9Y3T6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 FSCN1P1-201ENST00000568912 1481 ntBASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
R3HCC1Q9Y3T6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
R3HCC1Q9Y3T6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 AC004980.1-204ENST00000429707 299 ntBASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 AC022211.2-201ENST00000585075 2527 ntBASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.82■□□□□ 0.92
R3HCC1Q9Y3T6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HCC1Q9Y3T6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms