Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 AC012317.2-201ENST00000623305 2251 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 MIR149-201ENST00000384879 89 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 SDHAP2-201ENST00000455183 2001 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 AL135905.2-201ENST00000584934 1404 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CA15P1-201ENST00000481698 905 ntBASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPS28Q9Y2Q9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 AC036111.1-201ENST00000533973 1582 ntBASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms