Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AC009078.2-202ENST00000463353 338 ntBASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AC099343.3-201ENST00000605834 2503 ntBASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 AL024508.2-201ENST00000607749 1894 ntBASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
NCKAP1Q9Y2A7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 AC096582.2-201ENST00000510860 516 ntBASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 MIR5100-201ENST00000579544 119 ntBASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 AC009154.2-201ENST00000621177 724 ntBASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.19■□□□□ 0.5
NCKAP1Q9Y2A7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 AC068472.1-201ENST00000474589 881 ntBASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 AC064862.7-201ENST00000604520 867 ntBASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 REXO1L6P-202ENST00000619970 1078 ntBASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCKAP1Q9Y2A7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 AP002469.2-201ENST00000531724 424 ntBASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 BNIP3P18-201ENST00000593976 575 ntBASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
NCKAP1Q9Y2A7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms