Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 AC093458.2-201ENST00000623150 629 ntBASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 ESPNP-201ENST00000270691 2015 ntBASIC19.58■□□□□ 0.72
GTF3C4Q9UKN8 AL133373.2-201ENST00000623187 2828 ntBASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 MIR662-201ENST00000384847 95 ntBASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF3C4Q9UKN8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 AC011498.5-201ENST00000592027 486 ntBASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF3C4Q9UKN8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF3C4Q9UKN8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AC068880.1-201ENST00000507289 2297 ntBASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms