Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NCF1B-203ENST00000435988 1254 ntBASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 PTBP1P-201ENST00000554374 1601 ntBASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.39■□□□□ 0.05
UBQLN2Q9UHD9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 HYMAI-201ENST00000635591 3347 ntBASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 SLC29A4P1-201ENST00000398760 971 ntBASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 AL355802.2-201ENST00000402069 882 ntBASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 AC104771.1-201ENST00000603335 964 ntBASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UBQLN2Q9UHD9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 RARRES2P4-201ENST00000514074 484 ntBASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.37■□□□□ 0.05
UBQLN2Q9UHD9 LINC02199-201ENST00000506655 2702 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms