Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 AC087499.1-201ENST00000418141 1075 ntBASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAE1Q9UBE0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 LTB4R2-202ENST00000528054 3092 ntBASIC18.81■□□□□ 0.6
SAE1Q9UBE0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 AC093010.1-201ENST00000473625 1624 ntBASIC18.81■□□□□ 0.6
SAE1Q9UBE0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SAE1Q9UBE0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 MIR3180-4-201ENST00000582223 153 ntBASIC18.8■□□□□ 0.6
SAE1Q9UBE0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 LINC00896-202ENST00000609602 2128 ntBASIC18.8■□□□□ 0.6
SAE1Q9UBE0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SAE1Q9UBE0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 KRT18P22-201ENST00000402024 1347 ntBASIC18.79■□□□□ 0.6
SAE1Q9UBE0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms