Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RBM28Q9NW13 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBM28Q9NW13 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 AC132938.6-201ENST00000623828 1655 ntBASIC21.08■□□□□ 0.96
RBM28Q9NW13 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 AL390961.4-201ENST00000623958 2535 ntBASIC21.08■□□□□ 0.96
RBM28Q9NW13 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 LINC00602-201ENST00000629776 2065 ntBASIC21.08■□□□□ 0.96
RBM28Q9NW13 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBM28Q9NW13 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RBM28Q9NW13 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
RBM28Q9NW13 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 ARMC10P1-201ENST00000313754 855 ntBASIC21.07■□□□□ 0.96
RBM28Q9NW13 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 AL353692.3-201ENST00000407031 1396 ntBASIC21.07■□□□□ 0.96
RBM28Q9NW13 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 Z83836.1-201ENST00000624605 1642 ntBASIC21.07■□□□□ 0.96
RBM28Q9NW13 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBM28Q9NW13 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RBM28Q9NW13 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 DUTP2-201ENST00000519164 463 ntBASIC21.06■□□□□ 0.96
RBM28Q9NW13 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.06■□□□□ 0.96
RBM28Q9NW13 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RBM28Q9NW13 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBM28Q9NW13 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 FLJ13224-201ENST00000313737 1514 ntBASIC21.05■□□□□ 0.96
RBM28Q9NW13 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms