Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 KRT18P41-201ENST00000518924 1277 ntBASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2LQ9NUG4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 AC005521.1-201ENST00000393351 872 ntBASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 AC022211.2-201ENST00000585075 2527 ntBASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCM2LQ9NUG4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 HTR7P1-201ENST00000538670 1336 ntBASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 C1QL1P1-201ENST00000568105 661 ntBASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2LQ9NUG4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms