Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 MINOS1P3-201ENST00000457048 203 ntBASIC18.8■□□□□ 0.6
HPS4Q9NQG7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 AL662844.1-201ENST00000546340 181 ntBASIC18.8■□□□□ 0.6
HPS4Q9NQG7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 BNIP3P18-201ENST00000593976 575 ntBASIC18.8■□□□□ 0.6
HPS4Q9NQG7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HPS4Q9NQG7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 MIR149-201ENST00000384879 89 ntBASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC079776.4-201ENST00000511039 504 ntBASIC18.79■□□□□ 0.6
HPS4Q9NQG7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS4Q9NQG7 AC099343.3-201ENST00000605834 2503 ntBASIC18.78■□□□□ 0.6
HPS4Q9NQG7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 HLA-A-201ENST00000376802 1334 ntBASIC18.78■□□□□ 0.6
HPS4Q9NQG7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 TP73-AS1-207ENST00000624167 988 ntBASIC18.78■□□□□ 0.6
HPS4Q9NQG7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPS4Q9NQG7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 POM121L3P-201ENST00000419331 1163 ntBASIC18.77■□□□□ 0.6
HPS4Q9NQG7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPS4Q9NQG7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms