Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC073621.1-201ENST00000392730 636 ntBASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 FAM8A3P-201ENST00000427218 844 ntBASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 AC136632.2-201ENST00000512891 861 ntBASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFYVE28Q9HCC9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 CNN2P11-201ENST00000429351 262 ntBASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 ALG1L5P-201ENST00000482043 771 ntBASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 AP002472.1-201ENST00000577490 586 ntBASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 AC125437.2-201ENST00000625180 2167 ntBASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFYVE28Q9HCC9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 C20orf181-201ENST00000623918 480 ntBASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFYVE28Q9HCC9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms